2Q7J Hormone date Jun 07, 2007
title The Wild Type Androgen Receptor Ligand Binding Domain Bound Testosterone And A Tif2 Box 3 Coactivator Peptide 740-753
authors R.T.Gampe
compound source
Molecule: Androgen Receptor
Chain: A
Synonym: Dihydrotestosterone Receptor
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ar, Dhtr, Nr3c4
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Nuclear Receptor Coactivator 2
Chain: B
Synonym: Ncoa-2, Transcriptional Intermediary Factor 2
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ncoa2, Tif2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.180 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.779 66.871 70.237 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand GOL, SO4, TES BindingDB enzyme
Primary referenceModulation of androgen receptor activation function 2 by testosterone and dihydrotestosterone., Askew EB, Gampe RT Jr, Stanley TB, Faggart JL, Wilson EM, J Biol Chem. 2007 Jun 25;. PMID:17591767
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (2q7j.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 2Q7J
  • CSU: Contacts of Structural Units for 2Q7J
  • Likely Quarternary Molecular Structure file(s) for 2Q7J
  • Structure Factors (158 Kb)
  • Retrieve 2Q7J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q7J from S2C, [Save to disk]
  • Re-refined 2q7j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Q7J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Q7J
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Q7J, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q7j_B] [2q7j] [2q7j_A]
  • SWISS-PROT database: [P10275] [Q15596]
  • Domain organization of [ANDR_HUMAN] [NCOA2_HUMAN] by SWISSPFAM
  • Domain found in 2Q7J: [HOLI ] by SMART
  • Other resources with information on 2Q7J
  • Community annotation for 2Q7J at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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