2Q89 Transport Protein date Jun 09, 2007
title Crystal Structure Of Ehub In Complex With Hydroxyectoine
authors N.Hanekop, M.Hoeing, L.Sohn-Bosser, M.Jebbar, L.Schmitt, E.Bremer
compound source
Molecule: Putative Abc Transporter Amino Acid-Binding Prote
Chain: A
Synonym: Ehub
Engineered: Yes
Organism_scientific: Sinorhizobium Meliloti
Organism_taxid: 382
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
symmetry Space Group: P 43 21 2
R_factor 0.235 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.135 57.135 161.576 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand 6CS, CD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the ligand-binding protein EhuB from Sinorhizobium meliloti reveals substrate recognition of the compatible solutes ectoine and hydroxyectoine., Hanekop N, Hoing M, Sohn-Bosser L, Jebbar M, Schmitt L, Bremer E, J Mol Biol. 2007 Dec 14;374(5):1237-50. Epub 2007 Sep 29. PMID:17996893
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (2q89.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 2Q89
  • CSU: Contacts of Structural Units for 2Q89
  • Likely Quarternary Molecular Structure file(s) for 2Q89
  • Structure Factors (184 Kb)
  • Retrieve 2Q89 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q89 from S2C, [Save to disk]
  • Re-refined 2q89 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Q89 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Q89
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Q89, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q89] [2q89_A]
  • SWISS-PROT database: [Q92WC8]
  • Domain organization of [Q92WC8_RHIME] by SWISSPFAM
  • Domain found in 2Q89: [PBPb ] by SMART
  • Other resources with information on 2Q89
  • Community annotation for 2Q89 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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