2QOH	Transferase	date	Jul 20, 2007
title	Crystal Structure Of Abl Kinase Bound With Ppy-A
authors	T.Zhou, D.Dalgarno, X.Zhu
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Abl1 Chain: A, B Fragment: Residues 228-515 Synonym: P150, C-Abl, Abelson Murine Leukemia Viral Oncogene Homolog 1, Abl Kinase; Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.214 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 74.008 59.128 75.938 90.00 118.39 90.00
method	X-Ray Diffraction	resolution	1.95 Å
ligand	P3Y BindingDB	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal Structure of the T315I Mutant of AbI Kinase., Zhou T, Parillon L, Li F, Wang Y, Keats J, Lamore S, Xu Q, Shakespeare W, Dalgarno D, Zhu X, Chem Biol Drug Des. 2007 Sep;70(3):171-81. PMID:17718712

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk] Biological Unit Coordinates (2qoh.pdb1.gz) 49 Kb Biological Unit Coordinates (2qoh.pdb2.gz) 51 Kb LPC: Ligand-Protein Contacts for 2QOH CSU: Contacts of Structural Units for 2QOH Likely Quarternary Molecular Structure file(s) for 2QOH Structure Factors (535 Kb) Retrieve 2QOH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2QOH from S2C, [Save to disk] Re-refined 2qoh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2QOH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2QOH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2QOH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2qoh_B] [2qoh_A] [2qoh] SWISS-PROT database: [P00520] Domain organization of [ABL1_MOUSE] by SWISSPFAM Domain found in 2QOH: [TyrKc ] by SMART

Other resources with information on 2QOH

Community annotation for 2QOH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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