2QVO Structural Genomics, Unknown Function date Aug 08, 2007
title Crystal Structure Of Af1382 From Archaeoglobus Fulgidus
authors J.Zhu, M.Zhao, Z.Q.Fu, H.Yang, J.Chang, X.Hao, L.Chen, Z.J.Liu, J.P B.C.Wang, Southeast Collaboratory For Structural Genomics (S
compound source
Molecule: Uncharacterized Protein Af_1382
Chain: A
Engineered: Yes
 Organism_scientific: Archaeoglobus Fulgidus Dsm 4304
Organism_taxid: 224325
Strain: Vc-16, Jcm 9628, Nbrc 100126
Atcc: 49558
Gene: Af_1382
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-Rpx
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdest-527
symmetry Space Group: P 42
R_factor 0.237 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.033 53.033 40.968 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
Gene AF
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (2qvo.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (2qvo.pdb2.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2QVO
  • Likely Quarternary Molecular Structure file(s) for 2QVO
  • Structure Factors (87 Kb)
  • Retrieve 2QVO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QVO from S2C, [Save to disk]
  • Re-refined 2qvo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2QVO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2QVO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QVO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qvo] [2qvo_A]
  • SWISS-PROT database: [O28889]
  • Domain organization of [Y1382_ARCFU] by SWISSPFAM
    • Other resources with information on 2QVO
  • Community annotation for 2QVO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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