2R24 Oxidoreductase date Aug 24, 2007
title Human Aldose Reductase Structure
authors M.P.Blakeley, F.Ruiz, R.Cachau, I.Hazemann, F.Meilleur, A.Mitschl S.Ginell, P.Afonine, O.N.Ventura, A.Cousido-Siah, M.Haertlein, A.Joachimiak, D.Myles, A.Podjarny
compound source
Molecule: Aldose Reductase
Chain: A
Synonym: Ar, Aldehyde Reductase
Ec: 1.1.1.21
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.257 R_Free 0.291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.066 67.126 47.862 90.00 92.41 90.00
method X-Ray Diffraction; Neutron Diffractionresolution 1.75 Å
ligand LDT, NAP BindingDB enzyme Oxidoreductase E.C.1.1.1.21 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity
  • NADP-retinol dehydrogenase a...


    • Primary referenceQuantum model of catalysis based on a mobile proton revealed by subatomic x-ray and neutron diffraction studies of h-aldose reductase., Blakeley MP, Ruiz F, Cachau R, Hazemann I, Meilleur F, Mitschler A, Ginell S, Afonine P, Ventura ON, Cousido-Siah A, Haertlein M, Joachimiak A, Myles D, Podjarny A, Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):1844-8. Epub 2008 Feb 4. PMID:18250329
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (2r24.pdb1.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 2R24
  • CSU: Contacts of Structural Units for 2R24
  • Structure Factors (425 Kb)
  • Retrieve 2R24 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R24 from S2C, [Save to disk]
  • Re-refined 2r24 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2R24 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2R24
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2R24, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r24_A] [2r24]
  • SWISS-PROT database: [P15121]
  • Domain organization of [ALDR_HUMAN] by SWISSPFAM
    • Other resources with information on 2R24
  • Community annotation for 2R24 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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