2RA0	Hydrolase	date	Sep 14, 2007
title	X-Ray Structure Of Fxa In Complex With 7-Fluoroindazole
authors	M.C.Abad
compound		source
Molecule: Coagulation Factor X Chain: A Fragment: Heavy Chain, Unp Residues 235-468 Synonym: Stuart Factor, Stuart-Prower Factor Ec: 3.4.21.6 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F10 Expression_system_strain: Hek293ebna Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcep4 Other_details: Mammalian
Molecule: Coagulation Factor X Chain: L Fragment: Light Chain, Unp Residues 128-178 Synonym: Stuart Factor, Stuart-Prower Factor Ec: 3.4.21.6 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F10 Expression_system_strain: Hek293ebna Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcep4 Other_details: Mammalian
symmetry	Space Group: P 21 21 21	R_factor 0.246 R_Free 0.314
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.871 74.984 75.089 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	JNJ BindingDB	enzyme	Hydrolase E.C.3.4.21.6 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	7-fluoroindazoles as potent and selective inhibitors of factor xa., Lee YK, Parks DJ, Lu T, Thieu TV, Markotan T, Pan W, McComsey DF, Milkiewicz KL, Crysler CS, Ninan N, Abad MC, Giardino EC, Maryanoff BE, Damiano BP, Player MR, J Med Chem. 2008 Jan 24;51(2):282-97. Epub 2007 Dec 27. PMID:18159923

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk] Biological Unit Coordinates (2ra0.pdb1.gz) 48 Kb LPC: Ligand-Protein Contacts for 2RA0 CSU: Contacts of Structural Units for 2RA0 Likely Quarternary Molecular Structure file(s) for 2RA0 Structure Factors (104 Kb) Retrieve 2RA0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2RA0 from S2C, [Save to disk] Re-refined 2ra0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2RA0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2RA0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2RA0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ra0_L] [2ra0_A] [2ra0] SWISS-PROT database: [P00742] Domain organization of [FA10_HUMAN] by SWISSPFAM Domains found in 2RA0: [EGF] [Tryp_SPc ] by SMART

Other resources with information on 2RA0

Community annotation for 2RA0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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