2RJZ Structural Genomics, Unknown Function date Oct 16, 2007
title Crystal Structure Of The Type 4 Fimbrial Biogenesis Protein Pseudomonas Aeruginosa
authors J.B.Bonanno, J.Freeman, K.T.Bain, S.Chang, S.Ozyurt, D.Smith, S.Wa J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Structural Genomics (Nysgxrc)
compound source
Molecule: Pilo Protein
Chain: A, B
Fragment: Residues 69-204
Synonym: Type 4 Fimbrial Biogenesis Protein Pilo
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Pao1
Gene: Pilo
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Pet
Expression_system_plasmid: Modified Pet26
symmetry Space Group: P 64
R_factor 0.193 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.471 70.471 116.876 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePeriplasmic domains of Pseudomonas aeruginosa PilN and PilO form a stable heterodimeric complex., Sampaleanu LM, Bonanno JB, Ayers M, Koo J, Tammam S, Burley SK, Almo SC, Burrows LL, Howell PL, J Mol Biol. 2009 Nov 20;394(1):143-59. PMID:19857646
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (2rjz.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 2RJZ
  • CSU: Contacts of Structural Units for 2RJZ
  • Likely Quarternary Molecular Structure file(s) for 2RJZ
  • Structure Factors (125 Kb)
  • Retrieve 2RJZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RJZ from S2C, [Save to disk]
  • Re-refined 2rjz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2RJZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2RJZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RJZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rjz_B] [2rjz_A] [2rjz]
  • SWISS-PROT database: [Q51353]
  • Domain organization of [Q51353_PSEAE] by SWISSPFAM
  • Other resources with information on 2RJZ
  • Community annotation for 2RJZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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