2RLJ Viral Protein date Jul 05, 2007
title Nmr Structure Of Ebola Fusion Peptide In Sds Micelles At Ph
authors M.S.Freitas, L.P.Gaspar, M.Lorenzoni, F.C.Almeida, L.W.Tinoco, M.S.Almeida, L.F.Maia, L.Degreve, A.P.Valente, J.L.Silva
compound source
Molecule: Envelope Glycoprotein
Chain: A
Fragment: Ebola Fusion Peptide
Engineered: Yes
 Organism_scientific: Zaire Ebolavirus
Organism_taxid: 186538
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Primary referenceStructure of the Ebola fusion peptide in a membrane-mimetic environment and the interaction with lipid rafts., Freitas MS, Gaspar LP, Lorenzoni M, Almeida FC, Tinoco LW, Almeida MS, Maia LF, Degreve L, Valente AP, Silva JL, J Biol Chem. 2007 Jun 1;. PMID:17545161
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2rlj.pdb1.gz) 4 Kb
  • CSU: Contacts of Structural Units for 2RLJ
  • Original NMR restraints for 2RLJ from PDB
  • Retrieve 2RLJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RLJ from S2C, [Save to disk]
    • View 2RLJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RLJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RLJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rlj] [2rlj_A]
  • SWISS-PROT database: [Q05320]
  • Belongs to the avian leukosis virus gp95 fusion protein (alv-gp95) family according to TCDB.
  • Domain organization of [VGP_EBOZM] by SWISSPFAM
    • Other resources with information on 2RLJ
  • Community annotation for 2RLJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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