2RS7 Solution structure of the second dsRBD from RNA helicase A date
authors Nagata, T., Muto, Y., Tsuda, K., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yokoyama, S., RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceSolution structures of the double-stranded RNA-binding domains from RNA helicase A., Nagata T, Tsuda K, Kobayashi N, Shirouzu M, Kigawa T, Guntert P, Yokoyama S, Muto Y, Proteins. 2012 Jun;80(6):1699-706. doi: 10.1002/prot.24059. Epub 2012 Mar 27. PMID:22454253
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (568 Kb) [Save to disk]
  • Biological Unit Coordinates (2rs7.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 2RS7
  • Original NMR restraints for 2RS7 from PDB
  • Retrieve 2RS7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RS7 from S2C, [Save to disk]
    • View 2RS7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RS7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RS7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rs7] [2rs7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2RS7: [DSRM ] by SMART
    • Other resources with information on 2RS7
  • Community annotation for 2RS7 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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