2RU6 The pure alternative state of ubiquitin date
authors Kitazawa, S., Kameda, T., Kumo, A., Utsumi, M., Baxter, N., Kato, K., Williamson, M.P., Kitahara, R.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceClose Identity between Alternatively Folded State N2 of Ubiquitin and the Conformation of the Protein Bound to the Ubiquitin-Activating Enzyme., Kitazawa S, Kameda T, Kumo A, Yagi-Utsumi M, Baxter NJ, Kato K, Williamson MP, Kitahara R, Biochemistry. 2014 Jan 28;53(3):447-9. doi: 10.1021/bi401617n. Epub 2014 Jan 10. PMID:24401037
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (399 Kb) [Save to disk]
  • Biological Unit Coordinates (2ru6.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2RU6
  • Original NMR restraints for 2RU6 from PDB
  • Retrieve 2RU6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RU6 from S2C, [Save to disk]
  • View 2RU6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2RU6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RU6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ru6] [2ru6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2RU6: [UBQ ] by SMART
  • Other resources with information on 2RU6
  • Community annotation for 2RU6 at PDBWiki (http://pdbwiki.org)

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