2V15	Oxidoreductase	date	May 22, 2007
title	Terbium Binding In Streptococcus Suis Dpr Protein
authors	H.Havukainen, A.C.Papageorgiou, A.Kauko
compound		source
Molecule: Dna Protection During Starvation Protein Chain: A, B, C, D, E, F, G, H, I, J, K, L Fragment: Residues 8-172 Synonym: Dps-Like Peroxide Resistance Protein Ec: 1.16.-.- Engineered: Yes Other_details: N-Terminus Truncated And First Seven Residue		Organism_scientific: Streptococcus Suis Organism_taxid: 1307 Strain: D282 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pet30ek
symmetry	Space Group: P 21 21 21	R_factor 0.188 R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma 104.485 137.715 142.438 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	CA, CL, EPE, TB	enzyme	Oxidoreductase E.C.1.16 BRENDA
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L
Primary reference	Structural basis of the zinc- and terbium-mediated inhibition of ferroxidase activity in Dps ferritin-like proteins., Havukainen H, Haataja S, Kauko A, Pulliainen AT, Salminen A, Haikarainen T, Finne J, Papageorgiou AC, Protein Sci. 2008 Jun 13;. PMID:18552126

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (306 Kb) [Save to disk] Biological Unit Coordinates (2v15.pdb1.gz) 298 Kb LPC: Ligand-Protein Contacts for 2V15 CSU: Contacts of Structural Units for 2V15 Likely Quarternary Molecular Structure file(s) for 2V15 Structure Factors (1737 Kb) Retrieve 2V15 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2V15 from S2C, [Save to disk] Re-refined 2v15 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2V15 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2V15

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2V15, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2v15_C] [2v15_A] [2v15_B] [2v15_L] [2v15_K] [2v15_E] [2v15_F] [2v15_H] [2v15_D] [2v15] [2v15_J] [2v15_G] [2v15_I] SWISS-PROT database: [P0CB53] Domain organization of [DPS_STRSU] by SWISSPFAM

Other resources with information on 2V15

Community annotation for 2V15 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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