2VOO	Rna Binding Protein	date	Feb 19, 2008
title	Crystal Structure Of N-Terminal Domains Of Human La Protein With Rna Oligomer Uuuuuuuu
authors	O.Kotik-Kogan, E.R.Valentine, D.Sanfelice, M.R.Conte, S.Curry
compound		source
Molecule: Lupus La Protein Chain: A, B Fragment: N-Terminal Domain, Residues 4-194 Synonym: Human La Protein, Sjoegren Syndrome Type B Antigen Ribonucleoprotein, La Autoantigen; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Petm11
Molecule: 5'-R(Upupupupupupup)-3' Chain: C, D Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 21 21 2	R_factor 0.250 R_Free 0.279
crystal cell	length a length b length c angle alpha angle beta angle gamma 98.309 114.586 37.410 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural analysis reveals conformational plasticity in the recognition of RNA 3' ends by the human la protein., Kotik-Kogan O, Valentine ER, Sanfelice D, Conte MR, Curry S, Structure. 2008 Jun;16(6):852-62. PMID:18547518

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (2voo.pdb1.gz) 34 Kb Biological Unit Coordinates (2voo.pdb2.gz) 32 Kb CSU: Contacts of Structural Units for 2VOO Likely Quarternary Molecular Structure file(s) for 2VOO Structure Factors (297 Kb) Retrieve 2VOO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VOO from S2C, [Save to disk] Re-refined 2voo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VOO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2VOO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VOO, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2voo_B] [2voo_A] [2voo_C] [2voo] [2voo_D] SWISS-PROT database: [P05455] Domain organization of [LA_HUMAN] by SWISSPFAM Domains found in 2VOO: [LA] [RRM ] by SMART

Other resources with information on 2VOO

Community annotation for 2VOO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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