2VR6	Oxidoreductase	date	Mar 28, 2008
title	Crystal Structure Of G85r Als Mutant Of Human Cu,Zn Superoxi Dismutase (Cuznsod) At 1.3 A Resolution
authors	S.Antonyuk, X.Cao, S.V.Seetharaman, L.J.Whitson, A.B.Taylor, S.P. R.W.Strange, P.A.Doucette, A.Tiwari, L.J.Hayward, S.Padua, J.A.C J.Selverstone Valentine, S.S.Hasnain, P.J.Hart
compound		source
Molecule: Superoxide Dismutase [Cu-Zn] Chain: A, F Fragment: Residues 2-154 Ec: 1.15.1.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932
symmetry	Space Group: P 21 21 21	R_factor 0.132 R_Free 0.182
crystal cell	length a length b length c angle alpha angle beta angle gamma 35.296 73.746 111.424 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	CU, SCN, SO4, ZN	enzyme	Oxidoreductase E.C.1.15.1.1 BRENDA
Gene Ontology	Chain Function Process Component F, A superoxide dismutase activit... protein binding anterograde axonal transport... retrograde axonal transport
Primary reference	Structures of the G85R variant of SOD1 in Familial ALS., Cao X, Antonyuk S, Seetharaman SV, Whitson LJ, Taylor AB, Holloway SP, Strange RW, Doucette PA, Valentine JS, Tiwari A, Hayward LJ, Padua S, Cohlberg JA, Hasnain SS, Hart PJ, J Biol Chem. 2008 Mar 31;. PMID:18378676

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (132 Kb) [Save to disk] Biological Unit Coordinates (2vr6.pdb1.gz) 125 Kb LPC: Ligand-Protein Contacts for 2VR6 CSU: Contacts of Structural Units for 2VR6 Likely Quarternary Molecular Structure file(s) for 2VR6 Structure Factors (493 Kb) Retrieve 2VR6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VR6 from S2C, [Save to disk] Re-refined 2vr6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VR6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2VR6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VR6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vr6_F] [2vr6_A] [2vr6] SWISS-PROT database: [P00441] Domain organization of [SODC_HUMAN] by SWISSPFAM

Other resources with information on 2VR6

Community annotation for 2VR6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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