2W4E	Hydrolase	date	Nov 25, 2008
title	Structure Of An N-Terminally Truncated Nudix Hydrolase Dr2204 From Deinococcus Radiodurans
authors	A.M.D.Goncalves, E.Fioravanti, M.Stelter, S.Mcsweeney
compound		source
Molecule: Muttnudix Family Protein Chain: A, B Fragment: Residues 56-200 Synonym: Adp-Ribose Pyrophosphatase Ec: 3.6.1.13 Engineered: Yes		Organism_scientific: Deinococcus Radiodurans Organism_taxid: 243230 Strain: R1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pet151-Dtopo
symmetry	Space Group: P 43 21 2	R_factor 0.208 R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma 61.301 61.301 165.752 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand		enzyme	Hydrolase E.C.3.6.1.13 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of an N-terminally truncated Nudix hydrolase DR2204 from Deinococcus radiodurans., Goncalves AM, Fioravanti E, Stelter M, McSweeney S, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Nov 1;65(Pt, 11):1083-7. Epub 2009 Oct 13. PMID:19923723

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (2w4e.pdb1.gz) 44 Kb CSU: Contacts of Structural Units for 2W4E Structure Factors (383 Kb) Retrieve 2W4E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2W4E from S2C, [Save to disk] Re-refined 2w4e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2W4E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2W4E

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2W4E, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2w4e_A] [2w4e] [2w4e_B] SWISS-PROT database: [Q9RSC1] Domain organization of [Q9RSC1_DEIRA] by SWISSPFAM

Other resources with information on 2W4E

Community annotation for 2W4E at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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