2WKO	Oxidoreductase	date	Jun 16, 2009
title	Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a.
authors	S.V.Antonyuk, A.Galaleldeen, R.Strange, L.Whitson, N.Narayana, A. J.P.Schuermann, S.P.Holloway, S.S.Hasnain, P.J.Hart
compound		source
Molecule: Superoxide Dismutase [Cu-Zn] Chain: A Fragment: Residues 2-154 Synonym: Superoxide Dismutase Ec: 1.15.1.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Blood Expression_system: Saccharomyces Cerevisiae Expression_system_common: Baker'S Yeast Expression_system_taxid: 4932 Expression_system_plasmid: Yep351
Molecule: Superoxide Dismutase [Cu-Zn] Chain: F Fragment: Residues 2-154 Synonym: Superoxide Dismutase Ec: 1.15.1.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Blood Expression_system: Saccharomyces Cerevisiae Expression_system_common: Baker'S Yeast Expression_system_taxid: 4932 Expression_system_plasmid: Yep351
symmetry	Space Group: P 1 21 1	R_factor 0.174 R_Free 0.231
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.488 47.157 56.356 90.00 90.38 90.00
method	X-Ray Diffraction	resolution	1.97 Å
ligand	ACE, CSO, CU, IOD, ZN	enzyme	Oxidoreductase E.C.1.15.1.1 BRENDA
Gene Ontology	Chain Function Process Component F, A superoxide dismutase activit... protein binding anterograde axonal transport... retrograde axonal transport
Primary reference	Structural and biophysical properties of metal-free pathogenic SOD1 mutants A4V and G93A., Galaleldeen A, Strange R, Whitson LJ, Antonyuk S, Narayana N, Taylor AB, Schuermann JP, Holloway SP, Hasnain SS, Hart PJ, Arch Biochem Biophys. 2009 Oct 1. PMID:19800308

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (2wko.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 2WKO CSU: Contacts of Structural Units for 2WKO Structure Factors (736 Kb) Retrieve 2WKO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WKO from S2C, [Save to disk] Re-refined 2wko structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2WKO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2WKO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WKO, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wko] [2wko_A] [2wko_F] SWISS-PROT database: [P00441] Domain organization of [SODC_HUMAN] by SWISSPFAM

Other resources with information on 2WKO

Community annotation for 2WKO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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