2WNS Transferase date Jul 19, 2009
title Human Orotate Phosphoribosyltransferase (Oprtase) Domain Of -Monophosphate Synthase (Umps) In Complex With Its Substrat Orotidine 5'-Monophosphate (Omp)
authors M.Moche, A.Roos, C.H.Arrowsmith, H.Berglund, C.Bountra, R.Collins A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, A.Jo I.Johansson, T.Karlberg, T.Kotyenova, A.Kotzch, T.K.Nielsen, T.N C.Persson, J.Sagemark, H.Schueler, P.Schutz, M.I.Siponen, L.Sven A.G.Thorsell, L.Tresaugues, S.Vandenberg, J.Weigelt, M.Welin, M.Wisniewska, P.Nordlund
compound source
Molecule: Orotate Phosphoribosyltransferase
Chain: A, B
Fragment: Oprtase Domain, Residues 7-203
Synonym: Oprtase, Uridine 5'-Monophosphate Synthase
Ec: 2.4.2.10
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3) R3 Prare
Expression_system_plasmid: Pnic-Ch2
symmetry Space Group: P 1 21 1
R_factor 0.180 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.400 43.600 71.000 90.00 113.40 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand CL, OMP enzyme Transferase E.C.2.4.2.10 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (2wns.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 2WNS
  • CSU: Contacts of Structural Units for 2WNS
  • Structure Factors (376 Kb)
  • Retrieve 2WNS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WNS from S2C, [Save to disk]
  • Re-refined 2wns structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2WNS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2WNS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WNS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wns] [2wns_B] [2wns_A]
  • SWISS-PROT database: [P11172]
  • Domain organization of [PYR5_HUMAN] by SWISSPFAM
    • Other resources with information on 2WNS
  • Community annotation for 2WNS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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