2WTL Metal Binding Protein date Sep 17, 2009
title Crystal Structure Of Bfra From M. Tuberculosis
authors V.Gupta, R.K.Gupta, G.Khare, D.M.Salunke, A.K.Tyagi
compound source
Molecule: Bacterioferritin
Chain: A, B, C, D, E, F
Synonym: Bfr
Engineered: Yes
Other_details: This Is A Selenomethionyl Analog Of Bfra Fro Tuberculosis (Rv1876) With Mse31, Mse52, Mse107 And Mse141 M31, M52, M107 And M141
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 83332
Strain: H37rv
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pet21c
Expression_system_plasmid: Pet21c-Bfra
Other_details: Laboratory Strain Mycobacterium Tuberculosis
symmetry Space Group: I 4
R_factor 0.183 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
125.960 125.960 175.840 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.59 Å
ligand FE, MSE, UNL, UNX enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceCrystal structure of Bfr A from Mycobacterium tuberculosis: incorporation of selenomethionine results in cleavage and demetallation of haem., Gupta V, Gupta RK, Khare G, Salunke DM, Tyagi AK, PLoS One. 2009 Nov 25;4(11):e8028. PMID:19946376
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • Biological Unit Coordinates (2wtl.pdb1.gz) 628 Kb
  • LPC: Ligand-Protein Contacts for 2WTL
  • CSU: Contacts of Structural Units for 2WTL
  • Structure Factors (517 Kb)
  • Retrieve 2WTL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WTL from S2C, [Save to disk]
  • Re-refined 2wtl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WTL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WTL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WTL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wtl_C] [2wtl_A] [2wtl_D] [2wtl] [2wtl_F] [2wtl_E] [2wtl_B]
  • SWISS-PROT database: [P63697]
  • Domain organization of [BFR_MYCTU] by SWISSPFAM
  • Other resources with information on 2WTL
  • Community annotation for 2WTL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science