2X27 Membrane Protein date Jan 11, 2010
title Crystal Structure Of The Outer Membrane Protein Oprg From Ps Aeruginosa
authors D.S.Touw, D.R.Patel, B.Van Den Berg
compound source
Molecule: Outer Membrane Protein Oprg
Chain: X
Fragment: Mature Protein, Residues 23-232
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Strain: Pa01
Atcc: 47085
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: C43
Expression_system_plasmid: Pbad
symmetry Space Group: I 2 2 2
R_factor 0.191 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.050 58.380 164.433 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand C8E, NI enzyme
note 2X27 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceThe Crystal Structure of OprG from Pseudomonas aeruginosa, a Potential Channel for Transport of Hydrophobic Molecules across the Outer Membrane., Touw DS, Patel DR, van den Berg B, PLoS One. 2010 Nov 29;5(11):e15016. PMID:21124774
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (2x27.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 2X27
  • CSU: Contacts of Structural Units for 2X27
  • Structure Factors (142 Kb)
  • Retrieve 2X27 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2X27 from S2C, [Save to disk]
  • Re-refined 2x27 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2X27 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2X27
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2X27, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2x27_X] [2x27]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2X27
  • Community annotation for 2X27 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science