2X5Y	Immune System	date	Feb 11, 2010
title	Human Zc3hav1 (Artd13), C-Terminal Domain
authors	T.Karlberg, P.Schutz, C.H.Arrowsmith, H.Berglund, C.Bountra, R.Co A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, I.Jo A.Kallas, T.Kotenyova, P.Kraulis, M.Moche, P.Nordlund, T.Nyman, C M.I.Siponen, L.Svensson, A.G.Thorsell, L.Tresaugues, S.Van Den J.Weigelt, M.Welin, M.Wisniewska, H.Schuler
compound		source
Molecule: Zinc Finger Ccch-Type Antiviral Protein 1 Chain: A Fragment: C-Terminal Domain Residues 724-896 Synonym: Zinc Finger Ccch Domain-Containing Protein 2, Zinc Antiviral Protein, Zap; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) R3 Prare Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic-Bsa4
symmetry	Space Group: P 21 21 21	R_factor 0.130 R_Free 0.149
crystal cell	length a length b length c angle alpha angle beta angle gamma 47.858 54.103 69.284 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.05 Å
note	2X5Y is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Structural Basis for Lack of ADP-Ribosyltransferase Activity in Poly(ADP-Ribose) Polymerase-13/Zinc Finger Antiviral Protein., Karlberg T, Klepsch M, Thorsell AG, Andersson CD, Linusson A, Schuler H, J Biol Chem. 2015 Jan 29. pii: jbc.M114.630160. PMID:25635049

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (2x5y.pdb1.gz) 69 Kb CSU: Contacts of Structural Units for 2X5Y Structure Factors (582 Kb) Retrieve 2X5Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2X5Y from S2C, [Save to disk] Re-refined 2x5y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2X5Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2X5Y

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2X5Y, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2x5y] [2x5y_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 2X5Y

Community annotation for 2X5Y at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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