2XJZ	Oncoprotein	date	Jul 06, 2010
title	Crystal Structure Of The Lmo2:Ldb1-Lid Complex, C2 Crystal F
authors	K.El Omari, D.Karia, C.Porcher, E.J.Mancini
compound		source
Molecule: Rhombotin-2 Chain: A, B, C, D, E Fragment: Residues 26-156 Synonym: Lim Domain Only Protein 2, Cysteine-Rich Protein T Cell Translocation Protein 2, Lmo-2; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Lim Domain-Binding Protein 1 Chain: I, J, K, L, M Fragment: Residues 334-368 Synonym: Nuclear Lim Interactor, Carboxyl-Terminal Lim Doma Protein 2, Lim Domain-Binding Factor Clim2, Ldb-1, Clim-2, Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.228 R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma 179.920 55.530 114.710 90.00 90.11 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	CL, ZN	enzyme
Gene Ontology	Chain Function Process Component J, M, K, I, L
Primary reference	Structure of the leukemia oncogene LMO2: implications for the assembly of a hematopoietic transcription factor complex., El Omari K, Hoosdally SJ, Tuladhar K, Karia D, Vyas P, Patient R, Porcher C, Mancini EJ, Blood. 2011 Feb 17;117(7):2146-56. Epub 2010 Nov 12. PMID:21076045

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (276 Kb) [Save to disk] Biological Unit Coordinates (2xjz.pdb1.gz) 57 Kb Biological Unit Coordinates (2xjz.pdb2.gz) 60 Kb Biological Unit Coordinates (2xjz.pdb3.gz) 57 Kb Biological Unit Coordinates (2xjz.pdb4.gz) 57 Kb Biological Unit Coordinates (2xjz.pdb5.gz) 51 Kb LPC: Ligand-Protein Contacts for 2XJZ CSU: Contacts of Structural Units for 2XJZ Structure Factors (381 Kb) Retrieve 2XJZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XJZ from S2C, [Save to disk] Re-refined 2xjz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XJZ in 3D

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Visual 3D analysis of 2XJZ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XJZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xjz_E] [2xjz_B] [2xjz_I] [2xjz_A] [2xjz] [2xjz_C] [2xjz_J] [2xjz_L] [2xjz_D] [2xjz_M] [2xjz_K] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2XJZ: [LIM ] by SMART

Other resources with information on 2XJZ

Community annotation for 2XJZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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