2XP2	Transferase	date	Aug 24, 2010
title	Structure Of The Human Anaplastic Lymphoma Kinase In Complex Crizotinib (Pf-02341066)
authors	M.Mctigue, Y.Deng, W.Liu, A.Brooun, S.Timofeevski, T.Marrone, J.J.
compound		source
Molecule: Tyrosine-Protein Kinase Receptor Chain: A Fragment: Tyrosine Kinase Domain, Residues 105-423 Synonym: Anaplastic Lymphoma Kinase Ec: 2.7.10.1 Engineered: Yes Other_details: Nonphosphorylated		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac
symmetry	Space Group: P 21 21 21	R_factor 0.207 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.633 57.086 104.709 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	VGH BindingDB	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structure Based Drug Design of Crizotinib (PF-02341066), a Potent and Selective Dual Inhibitor of Mesenchymal-Epithelial Transition Factor (c-MET) Kinase and Anaplastic Lymphoma Kinase (ALK)., Cui JJ, Tran-Dube M, Shen H, Nambu M, Kung PP, Pairish M, Jia L, Meng J, Funk L, Botrous I, McTigue M, Grodsky N, Ryan K, Padrique E, Alton G, Timofeevski S, Yamazaki S, Li Q, Zou H, Christensen J, Mroczkowski B, Bender S, Kania RS, Edwards MP, J Med Chem. 2011 Sep 22;54(18):6342-6363. Epub 2011 Aug 18. PMID:21812414

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk] Biological Unit Coordinates (2xp2.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 2XP2 CSU: Contacts of Structural Units for 2XP2 Structure Factors (192 Kb) Retrieve 2XP2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XP2 from S2C, [Save to disk] Re-refined 2xp2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XP2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2XP2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XP2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xp2] [2xp2_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2XP2: [TyrKc ] by SMART

Other resources with information on 2XP2

Community annotation for 2XP2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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