2XWE X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH 5N,6S-(N'-(N-OCTYL)IMINO)-6-THIONOJIRIMYCIN IN THE ACTIVE SITE date
authors Brumshtein, B., Aguilar-Moncayo, M., Benito, J.M., Mellet, C.Ortiz., Fernandez, J.M.Garcia., Silman, I., Shaaltiel, Y., Sussman, J.L., Futerman, A.H.
compound source
symmetry
R_factor
R_Free 0.21337
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.31
ligand AMF, BMA, FUC, K, NAG, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • negative regulation of inter...

    • Primary referenceCyclodextrin-mediated crystallization of acid beta-glucosidase in complex with amphiphilic bicyclic nojirimycin analogues., Brumshtein B, Aguilar-Moncayo M, Benito JM, Garcia Fernandez JM, Silman I, Shaaltiel Y, Aviezer D, Sussman JL, Futerman AH, Ortiz Mellet C, Org Biomol Chem. 2011 Jun 7;9(11):4160-7. Epub 2011 Apr 11. PMID:21483943
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk]
  • Biological Unit Coordinates (2xwe.pdb1.gz) 85 Kb
  • Biological Unit Coordinates (2xwe.pdb2.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 2XWE
  • CSU: Contacts of Structural Units for 2XWE
  • Structure Factors (625 Kb)
  • Retrieve 2XWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XWE from S2C, [Save to disk]
  • Re-refined 2xwe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2XWE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2XWE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XWE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xwe] [2xwe_B] [2xwe_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2XWE
  • Community annotation for 2XWE at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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