2XZ0 Oxidoreductase Lipid Binding Protein date Nov 22, 2010
title The Structure Of The 2:1 (Partially Occupied) Complex Betwee Acyl Carrier Protein Desaturase From Ricinus Communis (Cast And Acyl Carrier Protein.
authors M.Moche, J.E.Guy, E.Whittle, J.Lengqvist, J.Shanklin, Y.Lindqvist
compound source
Molecule: Acyl-[Acyl-Carrier-Protein] Desaturase, Chloropla
Chain: A, B, C
Synonym: Delta(9) Stearoyl-Acyl Carrier Protein Desaturase, Acp Desaturase;
Ec: 1.14.19.2
Engineered: Yes
Organism_scientific: Ricinus Communis
Organism_common: Castor Bean
Organism_taxid: 3988
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Acyl Carrier Protein 1, Chloroplastic
Chain: D
Synonym: Acp I, Acyl Carrier Protein I
Engineered: Yes
Other_details: Ser38 (Sep In Sequence) Is A Phosphoserine

Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 31 2 1
R_factor 0.243 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
188.274 188.274 81.315 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand EDO, FE, SEP, ZN enzyme Oxidoreductase E.C.1.14.19.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


D


Primary referenceRemote control of regioselectivity in acyl-acyl carrier protein-desaturases., Guy JE, Whittle E, Moche M, Lengqvist J, Lindqvist Y, Shanklin J, Proc Natl Acad Sci U S A. 2011 Oct 4;108(40):16594-9. Epub 2011 Sep 19. PMID:21930947
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (392 Kb) [Save to disk]
  • Biological Unit Coordinates (2xz0.pdb1.gz) 239 Kb
  • Biological Unit Coordinates (2xz0.pdb2.gz) 265 Kb
  • LPC: Ligand-Protein Contacts for 2XZ0
  • CSU: Contacts of Structural Units for 2XZ0
  • Structure Factors (1762 Kb)
  • Retrieve 2XZ0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XZ0 from S2C, [Save to disk]
  • Re-refined 2xz0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XZ0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XZ0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XZ0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xz0_C] [2xz0] [2xz0_B] [2xz0_D] [2xz0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2XZ0
  • Community annotation for 2XZ0 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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