2XZS	Transferase	date	Nov 29, 2010
title	Death Associated Protein Kinase 1 Residues 1-312
authors	H.Yumerefendi, P.J.Mas, N.Dordevic, A.A.Mccarthy, D.J.Hart
compound		source
Molecule: Death Associated Kinase 1 Chain: A, B Fragment: Kinase Catalytic Domain, Residues 1-312 Synonym: Dap Kinase 1 Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pyum6002pet-9a
symmetry	Space Group: P 1 21 1	R_factor 0.183 R_Free 0.225
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.300 49.610 130.500 90.00 94.52 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	MG	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Death-Associated Protein Kinase Activity Is Regulated by Coupled Calcium/Calmodulin Binding to Two Distinct Sites., Simon B, Huart AS, Temmerman K, Vahokoski J, Mertens HD, Komadina D, Hoffmann JE, Yumerefendi H, Svergun DI, Kursula P, Schultz C, McCarthy AA, Hart DJ, Wilmanns M, Structure. 2016 Apr 20. pii: S0969-2126(16)30030-2. doi:, 10.1016/j.str.2016.03.020. PMID:27133022

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (205 Kb) [Save to disk] Biological Unit Coordinates (2xzs.pdb1.gz) 104 Kb Biological Unit Coordinates (2xzs.pdb2.gz) 96 Kb LPC: Ligand-Protein Contacts for 2XZS CSU: Contacts of Structural Units for 2XZS Structure Factors (635 Kb) Retrieve 2XZS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XZS from S2C, [Save to disk] Re-refined 2xzs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XZS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2XZS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XZS, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xzs_A] [2xzs] [2xzs_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2XZS: [S_TKc ] by SMART

Other resources with information on 2XZS

Community annotation for 2XZS at PDBWiki (http://pdbwiki.org)

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