2Y0O date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ARS, MSE, SO4, ZN enzyme
note 2Y0O is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of a D-lyxose isomerase from the sigma(B) regulon of Bacillus subtilis., Marles-Wright J, Lewis RJ, Proteins. 2011 Jun;79(6):2015-9. doi: 10.1002/prot.23028. Epub 2011 Apr, 25. PMID:21520290
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (2y0o.pdb1.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 2Y0O
  • CSU: Contacts of Structural Units for 2Y0O
  • Structure Factors (2422 Kb)
  • Retrieve 2Y0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Y0O from S2C, [Save to disk]
  • Re-refined 2y0o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Y0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2y0o] [2y0o_A]
  • SWISS-PROT database:

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