2YIY	Transferase Transferase Activator	date	May 17, 2011
title	Crystal Structure Of Compound 8 Bound To Tak1-Tab
authors	D.G.Brown, C.Phillips
compound		source
Molecule: Mitogen-Activated Protein Kinase Kinase Kinase 7, Activated Kinase 1 And Map3k7-Binding Protein 1; Chain: A Fragment: Kinase Domain, Residues 31-303, C-Terminal Domain 468-497; Synonym: Transforming Growth Factor-Beta-Activated Kinase 1 Activated Kinase 1, Protein Kinase Transforming Growth Fact Activated Kinase 1 Tak-1 Mitogen-Activated Protein Kinase K Kinase 7-Interacting Protein 1, Tgf-Beta-Activated Kinase 1 Protein 1, Tak1-Binding Protein 1; Ec: 2.7.11.25 Engineered: Yes Other_details: Chimeric Protein		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: High Five Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac
symmetry	Space Group: I 2 2 2	R_factor 0.188 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.401 133.422 145.769 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.49 Å
ligand	YIY	enzyme	Transferase E.C.2.7.11.25 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk] Biological Unit Coordinates (2yiy.pdb1.gz) 101 Kb LPC: Ligand-Protein Contacts for 2YIY CSU: Contacts of Structural Units for 2YIY Structure Factors (682 Kb) Retrieve 2YIY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YIY from S2C, [Save to disk] Re-refined 2yiy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YIY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2YIY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2YIY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yiy_A] [2yiy] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2YIY: [STYKc ] by SMART

Other resources with information on 2YIY

Community annotation for 2YIY at PDBWiki (http://pdbwiki.org)

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