2YW0	Lyase	date	Apr 18, 2007
title	Crystal Structure Of Hyluranidase Trimer At 2.6 A Resolution
authors	R.Prem Kumar, P.Mishra, N.Singh, M.Perbandt, P.Kaur, S.Sharma, C.B V.Bhakuni, T.P.Singh
compound		source
Molecule: Hyaluronidase, Phage Associated Chain: A Ec: 4.2.2.1 Engineered: Yes		Organism_scientific: Streptococcus Pyogenes Serotype M1 Organism_taxid: 301447 Strain: Serotype M1 Gene: Hyl P2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet21d
symmetry	Space Group: H 3 2	R_factor 0.191 R_Free 0.219
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.801 58.801 586.102 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand		enzyme	Lyase E.C.4.2.2.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Polysaccharide binding sites in hyaluronate lyase--crystal structures of native phage-encoded hyaluronate lyase and its complexes with ascorbic acid and lactose., Mishra P, Prem Kumar R, Ethayathulla AS, Singh N, Sharma S, Perbandt M, Betzel C, Kaur P, Srinivasan A, Bhakuni V, Singh TP, FEBS J. 2009 Jun;276(12):3392-402. Epub 2009 May 8. PMID:19438710

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (2yw0.pdb1.gz) 158 Kb CSU: Contacts of Structural Units for 2YW0 Likely Quarternary Molecular Structure file(s) for 2YW0 Retrieve 2YW0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YW0 from S2C, [Save to disk]

View 2YW0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2YW0

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2YW0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yw0_A] [2yw0] SWISS-PROT database: [Q9A0M7] Domain organization of [Q9A0M7_STRP1] by SWISSPFAM

Other resources with information on 2YW0

Community annotation for 2YW0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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