2Z8H Transcription date Sep 05, 2007
title Structure Of Mouse Bach1 Btb Domain
authors N.Ito, K.Murayama
compound source
Molecule: Transcription Regulator Protein Bach1
Chain: A
Fragment: Btb Domain, Unp Residues 1-135
Synonym: Btb And Cnc Homolog 1
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Bach1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28
symmetry Space Group: P 61 2 2
R_factor 0.229 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.188 106.188 91.011 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (2z8h.pdb1.gz) 43 Kb
  • CSU: Contacts of Structural Units for 2Z8H
  • Likely Quarternary Molecular Structure file(s) for 2Z8H
  • Structure Factors (93 Kb)
  • Retrieve 2Z8H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Z8H from S2C, [Save to disk]
  • Re-refined 2z8h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2Z8H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2Z8H
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Z8H, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2z8h_A] [2z8h]
  • SWISS-PROT database: [P97302]
  • Domain organization of [BACH1_MOUSE] by SWISSPFAM
  • Domain found in 2Z8H: [BTB ] by SMART
    • Other resources with information on 2Z8H
  • Community annotation for 2Z8H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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