2ZMM	Hydrolase	date	Apr 19, 2008
title	Crystal Structure Of Ptp1b-Inhibitor Complex
authors	W.Xu, J.Wu
compound		source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type 1 Chain: A Fragment: Catalytic Domain, Residues 1-299 Synonym: Protein-Tyrosine Phosphatase 1b, Ptp-1b Ec: 3.1.3.48 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ptp1b Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 31 2 1	R_factor 0.183 R_Free 0.214
crystal cell	length a length b length c angle alpha angle beta angle gamma 88.020 88.020 103.676 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	35B, CL, MG	enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structure-Based Optimization of Protein Tyrosine Phosphatase-1 B Inhibitors: Capturing Interactions with Arginine 24., Wan ZK, Lee J, Hotchandani R, Moretto A, Binnun E, Wilson DP, Kirincich SJ, Follows BC, Ipek M, Xu W, Joseph-McCarthy D, Zhang YL, Tam M, Erbe DV, Tobin JF, Li W, Tam SY, Mansour TS, Wu J, ChemMedChem. 2008 Sep 16. PMID:18798205

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (2zmm.pdb1.gz) 55 Kb LPC: Ligand-Protein Contacts for 2ZMM CSU: Contacts of Structural Units for 2ZMM Likely Quarternary Molecular Structure file(s) for 2ZMM Structure Factors (197 Kb) Retrieve 2ZMM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2ZMM from S2C, [Save to disk] Re-refined 2zmm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2ZMM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2ZMM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2ZMM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2zmm] [2zmm_A] SWISS-PROT database: [P18031] Domain organization of [PTN1_HUMAN] by SWISSPFAM Domains found in 2ZMM: [PTPc] [PTPc_DSPc ] by SMART

Other resources with information on 2ZMM

Community annotation for 2ZMM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---