304D Dna date Jan 03, 1997
title Side-By-Side Binding Of Distamycin Molecules To D(Icatatic) Monoclinic Form
authors X.Chen, B.Ramakrishnan, M.Sundaralingam
compound source
Molecule: Dna (5'-D(Ipcpaptpaptpipc)-3')
Chain: A
Engineered: Yes
Synthetic: Yes
symmetry Space Group: C 1 2 1
R_factor 0.184 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.380 25.330 28.110 90.00 120.45 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand DMY enzyme
Primary referenceCrystal structures of the side-by-side binding of distamycin to AT-containing DNA octamers d(ICITACIC) and d(ICATATIC)., Chen X, Ramakrishnan B, Sundaralingam M, J Mol Biol 1997 Apr 18;267(5):1157-70. PMID:9150404
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (9 Kb) [Save to disk]
  • Biological Unit Coordinates (304d.pdb1.gz) 7 Kb
  • LPC: Ligand-Protein Contacts for 304D
  • CSU: Contacts of Structural Units for 304D
  • Likely Quarternary Molecular Structure file(s) for 304D
  • Retrieve 304D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 304D from S2C, [Save to disk]
  • View 304D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • Visual 3D analysis of 304D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 304D, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [304d] [304d_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 304D
  • Community annotation for 304D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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