32C2	Immune System	date	Apr 21, 1999
title	Structure Of An Activity Suppressing Fab Fragment To Cytochr Aromatase
authors	M.W.Sawicki, P.C.Ng, B.Burkhart, V.Pletnev, T.Higashiyama, Y.Osaw
compound		source
Molecule: Igg1 Antibody 32c2 Chain: A Fragment: Light Chain, Variable Region		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090
Molecule: Igg1 Antibody 32c2 Chain: B Fragment: Heavy Chain, Variable Region		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090
symmetry	Space Group: P 21 21 21	R_factor 0.213 R_Free 0.317
crystal cell	length a length b length c angle alpha angle beta angle gamma 154.890 73.510 36.900 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
related structures	by homologous chain: 1DBK, 2GFB
Primary reference	Structure of an activity suppressing Fab fragment to cytochrome P450 aromatase: insights into the antibody-antigen interactions., Sawicki MW, Ng PC, Burkhart BM, Pletnev VZ, Higashiyama T, Osawa Y, Ghosh D, Mol Immunol 1999 May;36(7):423-32. PMID:10449095

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk] Biological Unit Coordinates (32c2.pdb1.gz) 67 Kb CSU: Contacts of Structural Units for 32C2 Likely Quarternary Molecular Structure file(s) for 32C2 Retrieve 32C2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 32C2 from S2C, [Save to disk]

View 32C2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 32C2

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 32C2, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d32c2a1, region A:1-110 [Jmol] [rasmolscript] [script source]     - Domain d32c2a2, region A:111-217 [Jmol] [rasmolscript] [script source]     - Domain d32c2b1, region B:1-119 [Jmol] [rasmolscript] [script source]     - Domain d32c2b2, region B:120-218 [Jmol] [rasmolscript] [script source]     - Domain d1n32c2, region C:107-207 [Jmol] [rasmolscript] [script source]     - Domain d1i32c2, region C:166-334 [Jmol] [rasmolscript] [script source]     - Domain d1q32c2, region C:302-538 [Jmol] [rasmolscript] [script source]     - Domain d1k32c2, region C:39-319 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [32c2] [32c2_A] [32c2_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 32C2: [IG_like] [IGv ] by SMART

Other resources with information on 32C2

Community annotation for 32C2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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