394D Dna-Rna Hybrid date Apr 29, 1998
title Crystal Structure Of Two Self-Complementary Chimeric Decamer R(C)D(Gccgg) And D(Ccgg)R(Cg)D(Ccgg)
authors C.Ban, M.Sundaralingam
compound source
Molecule: Dnarna (5'-D(Cpcpgpgp)-R(Cpgp)-D(Cpcpgp
Chain: A, B
Engineered: Yes
Synthetic: Yes
symmetry Space Group: P 21 21 21
R_factor 0.177 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
25.650 45.530 47.930 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (13 Kb) [Save to disk]
  • Biological Unit Coordinates (394d.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 394D
  • Likely Quarternary Molecular Structure file(s) for 394D
  • Retrieve 394D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 394D from S2C, [Save to disk]
  • View 394D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 394D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 394D, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [394d_A] [394d_B] [394d]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 394D
  • Community annotation for 394D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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