3HVP	Hydrolase(Acid Proteinase)	date	Aug 08, 1989
title	Conserved Folding In Retroviral Proteases. Crystal Structure Synthetic Hiv-1 Protease
authors	A.Wlodawer, M.Jaskolski, M.Miller
compound		source
Molecule: Unliganded Hiv-1 Protease Chain: A Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 41 21 2	R_factor R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.240 50.240 106.560 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	ABA	enzyme
related structures	by homologous chain: 1BDR, 9HVP
Gene Ontology	Chain Function Process Component A
Primary reference	Conserved folding in retroviral proteases: crystal structure of a synthetic HIV-1 protease., Wlodawer A, Miller M, Jaskolski M, Sathyanarayana BK, Baldwin E, Weber IT, Selk LM, Clawson L, Schneider J, Kent SB, Science 1989 Aug 11;245(4918):616-21. PMID:2548279

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (21 Kb) [Save to disk] Biological Unit Coordinates (3hvp.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 3HVP CSU: Contacts of Structural Units for 3HVP Likely Quarternary Molecular Structure file(s) for 3HVP Retrieve 3HVP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HVP from S2C, [Save to disk]

View 3HVP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3HVP

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3HVP, from MSDmotif at EBI Genome occurence of 3HVP's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d3hvp__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hvp_A] [3hvp] SWISS-PROT database: [P03369] Domain organization of [POL_HV1A2] by SWISSPFAM

Other resources with information on 3HVP

Community annotation for 3HVP at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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