3IIY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand M3L enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRole of the polycomb protein EED in the propagation of repressive histone marks., Margueron R, Justin N, Ohno K, Sharpe ML, Son J, Drury WJ 3rd, Voigt P, Martin SR, Taylor WR, De Marco V, Pirrotta V, Reinberg D, Gamblin SJ, Nature. 2009 Oct 8;461(7265):762-7. Epub 2009 Sep 20. PMID:19767730
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (3iiy.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 3IIY
  • CSU: Contacts of Structural Units for 3IIY
  • Structure Factors (205 Kb)
  • Retrieve 3IIY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IIY from S2C, [Save to disk]
  • Re-refined 3iiy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3IIY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3IIY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3IIY, from MSDmotif at EBI
  • Fold representative 3iiy from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3iiy] [3iiy_A] [3iiy_B]
  • SWISS-PROT database: [O75530]
  • Domain organization of [EED_HUMAN] by SWISSPFAM
  • Domain found in 3IIY: [WD40 ] by SMART
    • Other resources with information on 3IIY
  • Community annotation for 3IIY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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