3LZ2 Hydrolase(O-Glycosyl) date Sep 13, 1991
title Structure Determination Of Turkey Egg White Lysozyme Using L Diffraction
authors P.L.Howell, S.C.Almo, M.R.Parsons, J.Hajdu, G.A.Petsko
compound source
Molecule: Turkey Egg White Lysozyme
Chain: A
Ec: 3.2.1.17
Engineered: Yes
 Organism_scientific: Meleagris Gallopavo
Organism_common: Turkey
Organism_taxid: 9103
symmetry Space Group: P 61 2 2
R_factor 0.200 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.890 70.890 84.600 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand
enzyme Hydrolase E.C.3.2.1.17 BRENDA
related structures by homologous chain: 1FDL, 1MEL
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure determination of turkey egg-white lysozyme using Laue diffraction data., Howell PL, Almo SC, Parsons MR, Hajdu J, Petsko GA, Acta Crystallogr B 1992 Apr 1;48 ( Pt 2):200-7. PMID:1515108
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (3lz2.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 3LZ2
  • Likely Quarternary Molecular Structure file(s) for 3LZ2
  • Structure Factors (21 Kb)
  • Retrieve 3LZ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LZ2 from S2C, [Save to disk]
  • Re-refined 3lz2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3LZ2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3LZ2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LZ2, from MSDmotif at EBI
  • Genome occurence of 3LZ2's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3lz2__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lz2] [3lz2_A]
  • SWISS-PROT database: [P00703]
  • Domain organization of [LYSC_MELGA] by SWISSPFAM
  • Domain found in 3LZ2: [LYZ1 ] by SMART
    • Other resources with information on 3LZ2
  • Community annotation for 3LZ2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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