3MAN Hydrolase date Aug 12, 1998
title Mannohexaose Complex Of Thermomonospora Fusca Beta-Mannanase
authors M.Hilge, S.M.Gloor, K.Piontek
compound source
Molecule: Protein (Beta-Mannanase)
Chain: A
 Organism_scientific: Thermobifida Fusca
Organism_taxid: 2021
Strain: Kw3
Other_details: German Collection Of Microorganisms (Dsm)
symmetry Space Group: P 21 21 21
R_factor 0.128 R_Free 0.166
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.869 71.729 98.129 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand BMA, MAN enzyme
related structures by homologous chain: 1BQC, 2MAN
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh-resolution native and complex structures of thermostable beta-mannanase from Thermomonospora fusca - substrate specificity in glycosyl hydrolase family 5., Hilge M, Gloor SM, Rypniewski W, Sauer O, Heightman TD, Zimmermann W, Winterhalter K, Piontek K, Structure 1998 Nov 15;6(11):1433-44. PMID:9817845
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (3man.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 3MAN
  • CSU: Contacts of Structural Units for 3MAN
  • Likely Quarternary Molecular Structure file(s) for 3MAN
  • Structure Factors (326 Kb)
  • Retrieve 3MAN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MAN from S2C, [Save to disk]
  • Re-refined 3man structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3MAN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3MAN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MAN, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3mana_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3man] [3man_A]
  • SWISS-PROT database: [Q9ZF13]
  • Domain organization of [Q9ZF13_THEFU] by SWISSPFAM
    • Other resources with information on 3MAN
  • Community annotation for 3MAN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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