3S7Q date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, LBV, LBW, PO4 enzyme
Gene DR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-guided engineering enhances a phytochrome-based infrared fluorescent protein., Auldridge ME, Satyshur KA, Anstrom DM, Forest KT, J Biol Chem. 2012 Mar 2;287(10):7000-9. Epub 2011 Dec 30. PMID:22210774
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk]
  • Biological Unit Coordinates (3s7q.pdb1.gz) 187 Kb
  • LPC: Ligand-Protein Contacts for 3S7Q
  • CSU: Contacts of Structural Units for 3S7Q
  • Structure Factors (538 Kb)
  • Retrieve 3S7Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3S7Q from S2C, [Save to disk]
  • Re-refined 3s7q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3S7Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3S7Q
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3S7Q, from MSDmotif at EBI
  • Fold representative 3s7q from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3s7q] [3s7q_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3S7Q: [GAF] [PAS ] by SMART
  • Other resources with information on 3S7Q
  • Community annotation for 3S7Q at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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