3TIM	Isomerase(Intramolecular Oxidoreductase)	date	May 15, 1990
title	The Crystal Structure Of The "Open" And The "Closed" Conform The Flexible Loop Of Trypanosomal Triosephosphate Isomerase
authors	R.K.Wierenga
compound		source
Molecule: Triosephosphate Isomerase Chain: A, B Ec: 5.3.1.1 Engineered: Yes		Organism_scientific: Trypanosoma Brucei Brucei Organism_taxid: 5702 Strain: Brucei
symmetry	Space Group: P 21 21 21	R_factor R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 113.140 96.480 46.430 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand		enzyme	Isomerase E.C.5.3.1.1 BRENDA
related structures	by homologous chain: 1DKW, 1TSI
Gene Ontology	Chain Function Process Component A, B
Primary reference	The crystal structure of the "open" and the "closed" conformation of the flexible loop of trypanosomal triosephosphate isomerase., Wierenga RK, Noble ME, Postma JP, Groendijk H, Kalk KH, Hol WG, Opperdoes FR, Proteins 1991;10(1):33-49. PMID:2062827

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk] Biological Unit Coordinates (3tim.pdb1.gz) 75 Kb CSU: Contacts of Structural Units for 3TIM Likely Quarternary Molecular Structure file(s) for 3TIM Retrieve 3TIM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TIM from S2C, [Save to disk]

View 3TIM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3TIM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TIM, from MSDmotif at EBI Genome occurence of 3TIM's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d3tima_, region A [Jmol] [rasmolscript] [script source]     - Domain d3timb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tim_A] [3tim_B] [3tim] SWISS-PROT database: [P04789] Domain organization of [TPIS_TRYBB] by SWISSPFAM

Other resources with information on 3TIM

Community annotation for 3TIM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---