3A4P	Transferase	date	Jul 13, 2009
title	Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinolin Inhibitor
authors	T.A.Fukami, S.Kadono, M.Yamamuro, T.Matsuura
compound		source
Molecule: Hepatocyte Growth Factor Receptor Chain: A Fragment: Tyrosine Kinase Domain, Residues In Unp 1049-1360 Synonym: Hgf Receptor, Scatter Factor Receptor, Sf Receptor Receptor, Met Proto-Oncogene Tyrosine Kinase, C-Met; Ec: 2.7.10.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac
symmetry	Space Group: C 1 2 1	R_factor 0.183 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 157.227 42.733 46.039 90.00 102.91 90.00
method	X-Ray Diffraction	resolution	2.54 Å
ligand	CL, DFQ, IPA	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of 6-benzyloxyquinolines as c-Met selective kinase inhibitors., Nishii H, Chiba T, Morikami K, Fukami TA, Sakamoto H, Ko K, Koyano H, Bioorg Med Chem Lett. 2010 Feb 15;20(4):1405-1409. Epub 2010 Jan 4. PMID:20093027

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk] Biological Unit Coordinates (3a4p.pdb1.gz) 47 Kb LPC: Ligand-Protein Contacts for 3A4P CSU: Contacts of Structural Units for 3A4P Structure Factors (256 Kb) Retrieve 3A4P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3A4P from S2C, [Save to disk] Re-refined 3a4p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3A4P in 3D

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Visual 3D analysis of 3A4P

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3A4P, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3a4p_A] [3a4p] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3A4P: [TyrKc ] by SMART

Other resources with information on 3A4P

Community annotation for 3A4P at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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