3AAT Transferase(Aminotransferase) date Dec 06, 1990
title Activity And Structure Of The Active-Site Mutants R386y And Escherichia Coli Aspartate Aminotransferase
authors A.T.Danishefsky, D.Ringe, G.A.Petsko
compound source
Molecule: Aspartate Aminotransferase
Chain: A
Ec: 2.6.1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
156.000 87.600 78.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand PLP, SO4 enzyme Transferase E.C.2.6.1.1 BRENDA
related structures by homologous chain: 1AAM, 1AIB
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceActivity and structure of the active-site mutants R386Y and R386F of Escherichia coli aspartate aminotransferase., Danishefsky AT, Onnufer JJ, Petsko GA, Ringe D, Biochemistry 1991 Feb 19;30(7):1980-5. PMID:1993208
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (3aat.pdb1.gz) 106 Kb
  • LPC: Ligand-Protein Contacts for 3AAT
  • CSU: Contacts of Structural Units for 3AAT
  • Likely Quarternary Molecular Structure file(s) for 3AAT
  • Structure Factors (60 Kb)
  • Retrieve 3AAT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3AAT from S2C, [Save to disk]
  • Re-refined 3aat structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3AAT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3AAT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3AAT, from MSDmotif at EBI
  • Genome occurence of 3AAT's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3aat__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3aat] [3aat_A]
  • SWISS-PROT database: [P00509]
  • Domain organization of [AAT_ECOLI] by SWISSPFAM
  • Other resources with information on 3AAT
  • Community annotation for 3AAT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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