3B7L Transferase date Oct 31, 2007
title Human Farnesyl Diphosphate Synthase Complexed With Mg And Mi
authors E.S.Pilka, J.E.Dunford, K.Guo, A.C.W.Pike, K.L.Kavanagh, F.Von De F.H.Ebetino, C.H.Arrowsmith, A.M.Edwards, R.G.G.Russell, U.Oppe Structural Genomics Consortium (Sgc)
compound source
Molecule: Farnesyl Pyrophosphate Synthetase
Chain: A
Synonym: Fpp Synthetase, Fps, Farnesyl Diphosphate Syntheta
[Includes: Dimethylallyltranstransferase (Ec 2.5.1.1) And Geranyltranstransferase (Ec 2.5.1.10)];
Ec: 2.5.1.10
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fdps, Fps, Kiaa1293
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11 Derivative
symmetry Space Group: P 41 21 2
R_factor 0.169 R_Free 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.922 110.922 67.308 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand M0N, MG BindingDB enzyme Transferase E.C.2.5.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (3b7l.pdb1.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 3B7L
  • CSU: Contacts of Structural Units for 3B7L
  • Likely Quarternary Molecular Structure file(s) for 3B7L
  • Structure Factors (454 Kb)
  • Retrieve 3B7L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B7L from S2C, [Save to disk]
  • Re-refined 3b7l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3B7L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3B7L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3B7L, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b7l_A] [3b7l]
  • SWISS-PROT database: [P14324]
  • Domain organization of [FPPS_HUMAN] by SWISSPFAM
  • Other resources with information on 3B7L
  • Community annotation for 3B7L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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