3BEA	Transferase	date	Nov 16, 2007
title	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidino Inhibitor
authors	C.Schubert
compound		source
Molecule: Macrophage Colony-Stimulating Factor 1 Receptor Chain: A Synonym: Csf-1-R, Fms Proto-Oncogene, C-Fms, Cd115 Antigen Ec: 2.7.10.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Gene: Csf1r, Fms Expression_system: Spodoptera Frugiperda
symmetry	Space Group: H 3	R_factor 0.193 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.140 81.140 145.650 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.02 Å
ligand	IXH, SO4	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Design and synthesis of a pyrido[2,3-d]pyrimidin-5-one class of anti-inflammatory FMS inhibitors., Huang H, Hutta DA, Hu H, DesJarlais RL, Schubert C, Petrounia IP, Chaikin MA, Manthey CL, Player MR, Bioorg Med Chem Lett. 2008 Apr 1;18(7):2355-61. Epub 2008 Mar 4. PMID:18342505

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (3bea.pdb1.gz) 54 Kb LPC: Ligand-Protein Contacts for 3BEA CSU: Contacts of Structural Units for 3BEA Likely Quarternary Molecular Structure file(s) for 3BEA Structure Factors (180 Kb) Retrieve 3BEA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3BEA from S2C, [Save to disk] Re-refined 3bea structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3BEA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3BEA

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3BEA, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3bea] [3bea_A] SWISS-PROT database: [P07333] [Q02763] Domain organization of [CSF1R_HUMAN] [TIE2_HUMAN] by SWISSPFAM Domain found in 3BEA: [TyrKc ] by SMART

Other resources with information on 3BEA

Community annotation for 3BEA at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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