3BFK	Hydrolase	date	Nov 21, 2007
title	Crystal Structure Of Plasmodium Falciparum Rab11a In Complex
authors	J.C.Pizarro, D.Sukumar, A.Hassanali, L.Lin, A.K.Wernimont, J.Lew, I.Kozieradzki, A.M.Edwards, C.H.Arrowsmith, J.Weigelt, M.Sundst A.Bochkarev, R.Hui, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Small Gtpase Rab11 Chain: A, B, C, D, E Fragment: Residues 6-185 Ec: 3.6.5.2 Engineered: Yes		Organism_scientific: Plasmodium Falciparum Organism_taxid: 36329 Strain: 3d7 Gene: Pf13_0119 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Rossetta Oxford Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15-Mhl
symmetry	Space Group: P 1 21 1	R_factor 0.218 R_Free 0.259
crystal cell	length a length b length c angle alpha angle beta angle gamma 83.490 48.371 119.236 90.00 92.36 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	GDP, GOL	enzyme	Hydrolase E.C.3.6.5.2 BRENDA
Gene	PF13
Gene Ontology	Chain Function Process Component A, D, C, E, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk] Biological Unit Coordinates (3bfk.pdb1.gz) 30 Kb Biological Unit Coordinates (3bfk.pdb2.gz) 35 Kb Biological Unit Coordinates (3bfk.pdb3.gz) 33 Kb Biological Unit Coordinates (3bfk.pdb4.gz) 30 Kb Biological Unit Coordinates (3bfk.pdb5.gz) 30 Kb LPC: Ligand-Protein Contacts for 3BFK CSU: Contacts of Structural Units for 3BFK Likely Quarternary Molecular Structure file(s) for 3BFK Structure Factors (1311 Kb) Retrieve 3BFK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3BFK from S2C, [Save to disk] Re-refined 3bfk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3BFK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3BFK

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3BFK, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3bfk_D] [3bfk] [3bfk_E] [3bfk_A] [3bfk_C] [3bfk_B] SWISS-PROT database: [Q76NM4] Domain organization of [Q76NM4_PLAF7] by SWISSPFAM Domain found in 3BFK: [RAB ] by SMART

Other resources with information on 3BFK

Community annotation for 3BFK at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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