3BQT Structural Genomics, Unknown Function date Dec 20, 2007
title Crystal Structure Of A Protein Of Unknown Function From List Monocytogenes, Tetragonal Form
authors M.Madegowda, J.M.Sauder, S.K.Burley, S.Swaminathan, New York Sgx Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Uncharacterized Protein
Chain: A, B
Engineered: Yes
Mutation: Yes
 Organism_scientific: Listeria Monocytogenes Str. 4b F2365
Organism_taxid: 265669
Strain: F2365 Serotype 4b
Gene: Lmof2365_2733
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psgx3(Bc)
symmetry Space Group: P 43 21 2
R_factor 0.269 R_Free 0.299
crystal
cell
length a length b length c angle alpha angle beta angle gamma
107.378 107.378 37.544 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand MSE enzyme
Gene LMOF2365
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (3bqt.pdb1.gz) 26 Kb
  • Biological Unit Coordinates (3bqt.pdb2.gz) 14 Kb
  • Biological Unit Coordinates (3bqt.pdb3.gz) 14 Kb
  • LPC: Ligand-Protein Contacts for 3BQT
  • CSU: Contacts of Structural Units for 3BQT
  • Likely Quarternary Molecular Structure file(s) for 3BQT
  • Structure Factors (68 Kb)
  • Retrieve 3BQT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BQT from S2C, [Save to disk]
  • Re-refined 3bqt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3BQT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3BQT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BQT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bqt_A] [3bqt] [3bqt_B]
  • SWISS-PROT database: [Q71W18]
  • Domain organization of [Q71W18_LISMF] by SWISSPFAM
    • Other resources with information on 3BQT
  • Community annotation for 3BQT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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