3CBL Transferase date Feb 22, 2008
title Crystal Structure Of Human Feline Sarcoma Viral Oncogene Hom Fes) In Complex With Staurosporine And A Consensus Peptide
authors P.Filippakopoulos, E.Salah, C.Cooper, S.S.Picaud, J.M.Elkins, F.V C.H.Arrowsmith, A.M.Edwards, J.Weigelt, C.Bountra, S.Knapp, Stru Genomics Consortium (Sgc)
compound source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Fesfps
Chain: A
Fragment: Residues 448-822
Synonym: C-Fes
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fes, Fps
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-R3-Yop-Ppase
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4

Molecule: Synthetic Peptide
Chain: B
Engineered: Yes

Synthetic: Yes
Other_details: Synthetic Peptide
symmetry Space Group: P 21 21 21
R_factor 0.180 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.679 77.178 149.490 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand ACE, STU BindingDB enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural coupling of SH2-kinase domains links Fes and Abl substrate recognition and kinase activation., Filippakopoulos P, Kofler M, Hantschel O, Gish GD, Grebien F, Salah E, Neudecker P, Kay LE, Turk BE, Superti-Furga G, Pawson T, Knapp S, Cell. 2008 Sep 5;134(5):793-803. PMID:18775312
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (3cbl.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 3CBL
  • CSU: Contacts of Structural Units for 3CBL
  • Likely Quarternary Molecular Structure file(s) for 3CBL
  • Structure Factors (609 Kb)
  • Retrieve 3CBL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CBL from S2C, [Save to disk]
  • Re-refined 3cbl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3CBL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CBL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CBL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cbl_A] [3cbl_B] [3cbl]
  • SWISS-PROT database: [P07332]
  • Domain organization of [FES_HUMAN] by SWISSPFAM
  • Domains found in 3CBL: [SH2] [TyrKc ] by SMART
  • Other resources with information on 3CBL
  • Community annotation for 3CBL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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