3CRP Protein Binding date Apr 07, 2008
title A Heterospecific Leucine Zipper Tetramer
authors J.Liu
compound source
Molecule: Gcn4 Leucine Zipper
Chain: A, D
Fragment: Unp Residues 251-281
Synonym: Amino Acid Biosynthesis Regulatory Protein
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Gene: Gcn4, Aas3, Arg9
Expression_system: Escherichia Coli
Expression_system_strain: Bl21
Expression_system_vector_type: T7 Expression Vector
Expression_system_plasmid: Pae4

Molecule: Gcn4 Leucine Zipper
Chain: B, C, E
Fragment: Unp Residues 251-281
Synonym: Amino Acid Biosynthesis Regulatory Protein
Engineered: Yes

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Gene: Gcn4, Aas3, Arg9
Expression_system: Escherichia Coli
Expression_system_strain: Bl21
Expression_system_vector_type: T7 Expression Vector
Expression_system_plasmid: Pae4
symmetry Space Group: P 4 21 2
R_factor 0.203 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.473 79.473 54.947 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand NA enzyme
Primary referenceA heterospecific leucine zipper tetramer., Deng Y, Liu J, Zheng Q, Li Q, Kallenbach NR, Lu M, Chem Biol. 2008 Sep 22;15(9):908-19. PMID:18804028
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (3crp.pdb1.gz) 23 Kb
  • Biological Unit Coordinates (3crp.pdb2.gz) 12 Kb
  • LPC: Ligand-Protein Contacts for 3CRP
  • CSU: Contacts of Structural Units for 3CRP
  • Likely Quarternary Molecular Structure file(s) for 3CRP
  • Structure Factors (139 Kb)
  • Retrieve 3CRP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CRP from S2C, [Save to disk]
  • Re-refined 3crp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3CRP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CRP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CRP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3crp_A] [3crp_D] [3crp] [3crp_E] [3crp_C] [3crp_B]
  • SWISS-PROT database: [P03069]
  • Domain organization of [GCN4_YEAST] by SWISSPFAM
  • Other resources with information on 3CRP
  • Community annotation for 3CRP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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