3DFG Recombination date Jun 12, 2008
title Crystal Structure Of Recx: A Potent Inhibitor Protein Of Rec Xanthomonas Campestris
authors C.Y.Yang
compound source
Molecule: Regulatory Protein Recx
Chain: A
Synonym: Xcrecx
Engineered: Yes
Organism_scientific: Xanthomonas Campestris Pv. Campestris
Organism_taxid: 340
Gene: Xcc17
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: P 43
R_factor 0.198 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.100 45.100 93.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of RecX: a potent regulatory protein of RecA from Xanthomonas campestris., Yang CY, Chin KH, Yang MT, Wang AH, Chou SH, Proteins. 2009 Feb 1;74(2):530-7. PMID:19003992
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (3dfg.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 3DFG
  • Likely Quarternary Molecular Structure file(s) for 3DFG
  • Structure Factors (692 Kb)
  • Retrieve 3DFG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DFG from S2C, [Save to disk]
  • Re-refined 3dfg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DFG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3DFG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3DFG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dfg_A] [3dfg]
  • SWISS-PROT database: [Q8P9X1]
  • Domain organization of [RECX_XANCP] by SWISSPFAM
  • Other resources with information on 3DFG
  • Community annotation for 3DFG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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