3E9Y Transferase date Aug 24, 2008
title Arabidopsis Thaliana Acetohydroxyacid Synthase In Complex Wi Monosulfuron
authors L.W.Guddat, R.G.Duggleby, J.G.Wang, Z.M.Li
compound source
Molecule: Acetolactate Synthase, Chloroplastic
Chain: A
Fragment: Residues 87-670
Synonym: Acetohydroxy-Acid Synthase, Als
Ec: 2.2.1.6
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress
Organism_taxid: 3702
Gene: Csr 1.2, At3g48560, T8p19.70
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet30
symmetry Space Group: P 64 2 2
R_factor 0.192 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
178.866 178.866 186.078 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand 1MS, CSD, FAB, MG, NHE, TDM enzyme Transferase E.C.2.2.1.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of two novel sulfonylurea herbicides in complex with Arabidopsis thaliana acetohydroxyacid synthase., Wang JG, Lee PK, Dong YH, Pang SS, Duggleby RG, Li ZM, Guddat LW, FEBS J. 2009 Mar;276(5):1282-90. PMID:19187232
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (3e9y.pdb1.gz) 181 Kb
  • Biological Unit Coordinates (3e9y.pdb2.gz) 360 Kb
  • LPC: Ligand-Protein Contacts for 3E9Y
  • CSU: Contacts of Structural Units for 3E9Y
  • Likely Quarternary Molecular Structure file(s) for 3E9Y
  • Structure Factors (504 Kb)
  • Retrieve 3E9Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3E9Y from S2C, [Save to disk]
  • Re-refined 3e9y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3E9Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3E9Y
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3E9Y, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3e9y_A] [3e9y]
  • SWISS-PROT database: [P17597]
  • Domain organization of [ILVB_ARATH] by SWISSPFAM
  • Other resources with information on 3E9Y
  • Community annotation for 3E9Y at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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