3ECH Transcription, Transcription Regulation date Aug 30, 2008
title The Marr-Family Repressor Mexr In Complex With Its Antirepre
authors M.S.Wilke, N.C.J.Strynadka
compound source
Molecule: Multidrug Resistance Operon Repressor
Chain: A, B
Fragment: Residues 1-142
Synonym: Mexr
Engineered: Yes
Mutation: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Gene: Mexr, Pa0424
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet41a

Molecule: 25-Mer Fragment Of Protein Armr
Chain: C
Fragment: Residues 29-53
Engineered: Yes

Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Gene: Pa3719
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptyb12
symmetry Space Group: P 21 21 21
R_factor 0.176 R_Free 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.201 57.151 91.931 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe crystal structure of MexR from Pseudomonas aeruginosa in complex with its antirepressor ArmR., Wilke MS, Heller M, Creagh AL, Haynes CA, McIntosh LP, Poole K, Strynadka NC, Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14832-7. Epub 2008 Sep 23. PMID:18812515
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (3ech.pdb1.gz) 52 Kb
  • CSU: Contacts of Structural Units for 3ECH
  • Likely Quarternary Molecular Structure file(s) for 3ECH
  • Structure Factors (190 Kb)
  • Retrieve 3ECH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ECH from S2C, [Save to disk]
  • Re-refined 3ech structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ECH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ECH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ECH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ech] [3ech_C] [3ech_B] [3ech_A]
  • SWISS-PROT database: [P52003] [Q9HXS2]
  • Domain organization of [MEXR_PSEAE] [Q9HXS2_PSEAE] by SWISSPFAM
  • Domain found in 3ECH: [HTH_MARR ] by SMART
  • Other resources with information on 3ECH
  • Community annotation for 3ECH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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