3EUP Transcription Regulator date Oct 10, 2008
title The Crystal Structure Of The Transcriptional Regulator, Tetr From Cytophaga Hutchinsonii
authors R.Zhang, L.Bigelow, J.Abdullah, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Transcriptional Regulator, Tetr Family
Chain: A, B
Engineered: Yes
 Organism_scientific: Cytophaga Hutchinsonii
Organism_taxid: 269798
Strain: Atcc 33406
Gene: Chu_2862, Envr, Gi:110639243
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 21 21 21
R_factor 0.182 R_Free 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.595 53.400 178.005 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.99 Å
ligand SO4 enzyme
Gene CHU
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (3eup.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 3EUP
  • CSU: Contacts of Structural Units for 3EUP
  • Likely Quarternary Molecular Structure file(s) for 3EUP
  • Structure Factors (217 Kb)
  • Retrieve 3EUP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EUP from S2C, [Save to disk]
  • Re-refined 3eup structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3EUP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3EUP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EUP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3eup_B] [3eup_A] [3eup]
  • SWISS-PROT database: [Q11R54]
  • Domain organization of [Q11R54_CYTH3] by SWISSPFAM
    • Other resources with information on 3EUP
  • Community annotation for 3EUP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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